CDS

Accession Number TCMCG051C02534
gbkey CDS
Protein Id XP_024462024.1
Location join(16484667..16484873,16484975..16485727,16486019..16486174,16486834..16487793,16488569..16488610)
Gene LOC7470572
GeneID 7470572
Organism Populus trichocarpa

Protein

Length 705aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024606256.1
Definition VHS domain-containing protein At3g16270 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category S
Description VHS domain-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K00784        [VIEW IN KEGG]
EC 3.1.26.11        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005802        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030136        [VIEW IN EMBL-EBI]
GO:0030276        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0035459        [VIEW IN EMBL-EBI]
GO:0035652        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044431        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098791        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATTCGAGCAGGAGAGCGGTGGAATCGTACTGGAGATCGAGGATGATCGATGGAGCAACATCTGATGAAGACAAAGTCACTCCTGTTTACAAATTGGAAGAGATTTGTGAGCTCTTGAGGTCTTCTCATGTTACTATTGTCAAAGAGGTCTCCGACTTTATACTCAAGAGGCTTGACCACAAGAGTCCCGTTGTTAAACAAAAGGCGTTGAGATTGATAAAATATGCTGTGGGAAAGTCTGGTGGAGAGTTCAGAAGGGAAATGCAAAGACATTCTGCTGCTGTGCGTCAGTTGTTTCATTACAAGGGTCAGATGGATTCTTTGAAGGGGGATGCCCTTAACAAAGCAGTGAGGGATACAGCTCATGAGACTATCTCTGCTATTTTTTCCGAGGAGAATGGTAAGCCAGCTGCTCCTGCTGAAAATCTTAACAAACGAATACAAGGTTTTGGGAATACGAATTTTGATATGCCATATGAAGATAAAAAATCGTTCCTTACCGAGGTAGTTGGTCTTGGTAGTGCGTCTATCAAGCAGGGAATTACTAGCCTAACACAAAGTCATTCGTTAAGAAAGAATGATAATGGGAGCTACAAGAGCCCAAATCTTCATCGGTCATTGACCATAGAAAATGACTCCTCGGATAGATATCAACCAGTTCAGTTGAACAATGAAGCTCAGGGTAGTTCTGGAGTTTCTAAGAATGTGGCCACGGGACCTTGGGGCCACGACTCGAGAGTAATGAATGCAGAAACAAAAAAGGAGGACTCCAGCTCACGCTATACAGAGAGTAAGACTCGCGAGGAGAAGTTGTTAGAGACCATAGTGACATCTGGTGGTGTGCGGCTACAACCTACCCGTGATGCCATTCAAGCTTTTCTAGAGGAGGCAGCAAAGTTGAATGTATTGGCTCTAAGTCATGCCCTTGAATCCAAGCTTCAATCTCCTGTGTGGCAGGCTCGCATGAAAGCTGTGTGCCTACTTGAGTCAATTCTGAGGAGAAAGGATGATGAACAATTTTCAATTGTATATTCATATTTTAGCGAAAATAAAGATTCTGTTGTGAGATGTTCTGAATCTCCCCAAAACTCTCTCAGGGAAAAGGCTAACAAGGTGCTAAGCCTTTTGGGTGGGGAATCACTTGGTAACATGGTAGGTAATTCAGTAAAGGCTGAGACAGCTCATGTCCAGATGCCTGACTTAATGGACACTGGAGATTCAGATGATTTCTTTGGGACAGATGATTCTATAAAGAAGCAAAGTGAACAACATATAGTGAACCCTATGACATCAACAACCCCTTTAATTGATGATCTATTTGGAGATGGTGTTGGCACGGGTGTTAGTACCGGGGAGGAGCAGAAAAATGAAGATCCCTTTGCAGATGTTTCATTTCACACTAGTGAGGGTAGGGAGCATGGGGATGATCTCTTTTCTGGGATGACTTTTGATGATAAACCAGGTGCTGATGAGAACCATATGCCTGCCAATGAAAATGGACCCGAGCTATTTGATATCTTTGGGTCAAATTCTGAATTTTTGAAGGGGCAAGAAAATAGTGAAACAGGTGTTAGTGGCTTAATGGCGAGCATGTCCATTAATGATAATGTCTCGAAGCTGCAAGTAACCTCTCCGGCAGTGTTCTCAGAAAGTCTCTTCTCGGATTTAACCAGTAATCCAAGCCATCAGGTCACAAATGATGCTTTGAATGGCTCGCTTGGCTTGTCAGCGACTGGGATAAATGTAAACCCACTACATCCTTCCGGTACCGTGCCATATAATATGCATCCTGGCATAATGTTGAACCCAGCTTTTCATTCTCAGCCGATAAATTATGCTGCCATGGGGAATTTTCTTGCACAACAGCAATTTCTTGCAACAATGTCCAACATTCAACATCTAAGTAACCTAAATGTGCAAAATGCTGGTGTTAGTCATGCTTCGGGGACTGATGGAGGTGGATATTCTTCTGCACTTCCTGACATATTCCAATCGAACTTCCCAAATCAGGCTCCTACTTCAACAATGAACAGCTCTAAAAAAGAAGATACCAGAGCATTTGATTTTATCTCAGACCATGTTGCAGCAGCACGTGATCCAAAGAGAGTGGCCTAG
Protein:  
MDSSRRAVESYWRSRMIDGATSDEDKVTPVYKLEEICELLRSSHVTIVKEVSDFILKRLDHKSPVVKQKALRLIKYAVGKSGGEFRREMQRHSAAVRQLFHYKGQMDSLKGDALNKAVRDTAHETISAIFSEENGKPAAPAENLNKRIQGFGNTNFDMPYEDKKSFLTEVVGLGSASIKQGITSLTQSHSLRKNDNGSYKSPNLHRSLTIENDSSDRYQPVQLNNEAQGSSGVSKNVATGPWGHDSRVMNAETKKEDSSSRYTESKTREEKLLETIVTSGGVRLQPTRDAIQAFLEEAAKLNVLALSHALESKLQSPVWQARMKAVCLLESILRRKDDEQFSIVYSYFSENKDSVVRCSESPQNSLREKANKVLSLLGGESLGNMVGNSVKAETAHVQMPDLMDTGDSDDFFGTDDSIKKQSEQHIVNPMTSTTPLIDDLFGDGVGTGVSTGEEQKNEDPFADVSFHTSEGREHGDDLFSGMTFDDKPGADENHMPANENGPELFDIFGSNSEFLKGQENSETGVSGLMASMSINDNVSKLQVTSPAVFSESLFSDLTSNPSHQVTNDALNGSLGLSATGINVNPLHPSGTVPYNMHPGIMLNPAFHSQPINYAAMGNFLAQQQFLATMSNIQHLSNLNVQNAGVSHASGTDGGGYSSALPDIFQSNFPNQAPTSTMNSSKKEDTRAFDFISDHVAAARDPKRVA